The BioImage Suite Datatree Tool: Enabling Flexible Realtime Surgical Visualizations

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DPID: 1228DOI: 10.62891/67a4086ePublished:

Abstract

This paper describes the Datatree module of BioImage Suite, that allows for rapid and flexible reslicing of images based on a user-defined tree structure that organizes image and transformation data as well as electrode localizations, image landmarks, and surface objects. This Datatree tool provides abstracted file loading, allowing for interface with databases, as well as multisubject capabilities, other plugins designed for specific image modalities, and an incr Tcl based API, allowing users to extend its functionality with their own plugins.